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- Twigger,S; Smith,J; Zuniga-Meyer,A; Bromberg, S.(2006) Exploring phenotype data at the Rat Genome Database. Current Protocols in Bioinformatics. Hoboken, NJ: Wiley; 2006. pp. 1.14.1–1.14.27
- De la Cruz N, Bromberg S, Pasko D, Shimoyama M, Twigger S, Chen J, Chen CF, Fan C, Foote C, Gopinath GR, Harris G, Hughes A, Ji Y, Jin W, Li D, Mathis J, Nenasheva N, Nie J, Nigam R, Petri V, Reilly D, Wang W, Wu W, Zuniga-Meyer A, Zhao L, Kwitek A, Tonellato P, Jacob H. The Rat Genome Database (RGD): developments towards a phenome database. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D485-91.
- Twigger SN, Pasko D, Nie J, Shimoyama M, Bromberg S, Campbell D, Chen J, dela Cruz N, Fan C, Foote C, Harris G, Hickmann B, Ji Y, Jin W, Li D, Mathis J, Nenasheva N, Nigam R, Petri V, Reilly D, Ruotti V, Schauberger E, Seiler K, Slyper R, Smith J, Wang W, Wu W, Zhao L, Zuniga-Meyer A, Tonellato PJ, Kwitek AE, Jacob HJ. (2005) Tools and strategies for physiological genomics: the Rat Genome Database. Physiol Genomics. 2005 Oct 17;23(2):246-56. Epub 2005 Aug 16.
- Simon N. Twigger, Jeff Nie, Victor Ruotti, Jiaming Yu, Dan Chen,
Dawei Li, Jed Mathis, Vijay Narayanasamy, Gopal R. Gopinath,
Dean Pasko, Mary Shimoyama, Norberto de la Cruz, Susan Bromberg,
Anne E. Kwitek, Howard J. Jacob and Peter J. Tonellato (2004) Integrative
Genomics: In Silico Coupling of Rat Physiology and Complex
Traits With Mouse and Human Data, Genome Research. 2004 April; 14(4):651-60.
- Jacob W. Tatay, Xing Feng, Nancy Sobczak, Hao Jiang, Chin-Fu
Chen, Roumyana Kirova, Craig Struble, Nan Jiang Wang and Peter J. Tonellato (2003) Multiple
Approaches to data-mining of proteomic data based on statistical and
pattern classification methods, Cold Spring Harbor Laboratory Press ISSN 1088-9051/04.
- Michael A. Thomas, Chin-Fu Chen, Michael I. Jensen-Seaman,
Peter J. Tonellato and Simon N. Twigger(2003) Phylogenetics
of Rat Inbred Strains.Mammalian Genome. 2003 January; 14(1):61-4
- Simon Twigger, Jian Lu, Mary Shimoyama, Deying Chen,
Dean Pasko, Hanping Long, Jessica Ginster, Chin-Fu Chen, Rajni
Nigam, Anne Kwitek-Black, Janan Eppig, Lois Maltais, Donna Maglott,
Greg Schuler, Howard Jacob and Peter Tonellato (2002)
Rat Genome Database (RGD) - mapping disease onto the genome.
Nucleic Acids Research. 2002 January 1; 30(1): 125-128.
- Anne E. Kwitek-Black, Peter J. Tonellato, Dan Chen,
Jo Gullings-Handley, Yongjian Samuel Cheng, Simon Twigger, Todd
E. Scheetz, Thomas L. Casavant, Monika Stoll, Marcelo A. Nobrega,
Masahide Shiozawa, M. Bento Soares, Val C. Sheffield, Howard J.
Jacob (2001) Automated Construction of High-Density
Comparative Maps Between Rat, Human, and Mouse. Genome Research
2001 November; 11(11): 1935-1943.
- S. Twigger, J. Lu, M. Shimoyama, D. Pasko, P. Long,
J. Ginster, C.F. Chen, R. Nigam, D. Chen, Z. Wang, A. Kwitek-Black,
J. Eppig, D. Maglott, G. Schuler, F. Stahl, G. Levan, H. Jacob
and P.J. Tonellato. Rat Genome Database: A comparative
genomics platform for rat, mouse and human, Journal of Molecular
Medicine, 79(2-3):B30, 2001.
- Gosele C, Hong L, Kreitler T, Rossmann M, Hieke B, Gross
U, Kramer M, Himmelbauer H, Bihoreau MT, K , Twigger S, Tonellato
PJ, Jacob HJ, Schalkwyk LC, Lindpaintner K, Ganten D, Lehrach
H, Knoblauch M. (2000) High-throughput scanning of
the rat genome using interspersed repetitive sequence-PCR markers,
Genomics 69(3):287-94.
- Nora E.H., Tonellato P.J., Greene A.S., Quantification
of the Contribution of Type 1 and Type 2 Angiotensin II Receptors
to the Net Tissue Specific Effect of Angiotensin II, Annals
of Biomedical Engineering, September, 2000.
- Kendziorski C.M., Cowley, A.W., Jr., Greene , A.S., Stoll
, M., Salgado , H.C., Jacob, H.J., Tonellato P.J., Using
Mechanistic Mapping to Locate Genes Involved In Complex Regulatory
Reflexes, Nature Genetics.
- Tonellato, P., Kendziorski, C.M., Cowley, A.W., Jr.,
Characterization of blood pressure dynamics of the rat: a model
based approach, The Americal Physiological Society, February,
2000.
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