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    Literature Curation Software for Model Organism
    Databases (GMOD)



Principle Investigator:

Simon Twigger, Ph.D., Co.PI (PI at MCW)

Grant:

Funded by the National Human Genome Research Institute.

Project manager:

, Ph.D. Tel: 414-456-8802.

The Goals:

The peer-reviewed, research article published by scientific publishers and societies are the best medium for representing and disseminating the refinement of knowledge of scientists today. For any model organism database, the literature is one of the main sources of data, and significant amounts of resource, time, and effort are devoted to capturing this information. This project involves the design of a literature curation tool to facilitate the curation process by utilizing semi-automatic ways of data capture and using web-browser based applications to allow many curators to track their own work and share the methods, rules, and decisions made during the annotation process with other curators. The long-term goal is to develop a set of systematic procedures and tools of transferring knowledge from the more confined context of a research article to the more dynamic, broader context of a model organism database.

Collaboration:

Sue Rhee, Ph.D., Director. The Arabidopsis Information Resource, PI.

Personnel:

  • Simon Twigger, Ph.D.
  • Susan Bromberg, Ph.D.

Links:

Interested in learning more about this project? Check out the project online by following the links below:

Rat Genome Database: http://rgd.mcw.edu
TAIR: http://www.arabidopsis.org
Generic Model Organism Database project: http://www.gmod.org

Timeline:

 

Jan.31, 2003

Initial project meeting at Carnegie Institution, Stanford, CA

 

 

 

 

Medical College of Wisconsin
 
  

© 2006, Bioinformatics Program, HMGC, Medical College of Wisconsin.